BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008C06SP1|AL425831
(800 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1023 1450 0.0
>3x_Contig1023
Length = 4339
Score = 1450 bits (719), Expect = 0.0
Identities = 771/800 (96%), Gaps = 3/800 (0%)
Strand = Plus / Plus
Query: 1 cgttgtccaacaaacttttatttgggctctttttttgatgcttgccattgatgcacattc 60
||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 1547 cgttgtccaacaaacttttatttgggctctttttttg-tgcttgccattgatgcc--ttc 1603
Query: 61 acgggatgcctgattggtattaatttgagagcgaagacggaaagttccttttttttgtcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1604 acgggatgcctgattggtattaatttgagagcgaagacggaaagttccttttttttgtcc 1663
Query: 121 awgcagcaaaagtttgcctatwatgtttcccacgtgcattaaactgaatwaagtwgtatg 180
| ||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||
Sbjct: 1664 atgcagcaaaagtttgcctattatgtttcccacgtgcattaaactgaattaagttgtatg 1723
Query: 181 ccactcgtaacwccacaatgtcatagatwtcgggagcatttcggcawaawgawgagatat 240
||||||||||| |||||||||||||||| ||||||||||||||||| || || |||||||
Sbjct: 1724 ccactcgtaactccacaatgtcatagatttcgggagcatttcggcataatgatgagatat 1783
Query: 241 gatttcactgtatcttgaagcwcgcatcttgtaaactactttccaccgttcctttcaaag 300
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1784 gatttcactgtatcttgaagctcgcatcttgtaaactactttccaccgttcctttcaaag 1843
Query: 301 ttgtttcctcagactaacawgccaaawgaaaggtatgttttagtttctatagaagcacga 360
||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 1844 ttgtttcctcagactaacatgccaaatgaaaggtatgttttagtttctatagaagcacga 1903
Query: 361 accgtaacaccgaatacccttcaataacgcaaaatgatcggcaatccgagtacctaatca 420
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1904 accgtaacaccgaatacccttcaataacgcaaaatgatcggcaatccgtgtacctaatca 1963
Query: 421 tctcwaagcgtttcattgcwtaaccwcttgtagatattcttgtatgcyattgaatwttga 480
|||| |||||||||||||| ||||| ||||||||||||||||||||| ||||||| ||||
Sbjct: 1964 tctctaagcgtttcattgcttaacctcttgtagatattcttgtatgctattgaattttga 2023
Query: 481 gagaawatcactaatttcgtcgtcattagtcaagtcaacttcttccaactcaagaatttt 540
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2024 gagaatatcactaatttcgtcgtcattagtcaagtcaacttcttccaactcaagaatttt 2083
Query: 541 caacaacatcaacttatagttttccccgtactccacawcatccatgtcaactgtgaaatt 600
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2084 caacaacatcaacttatagttttccccgtactccacatcatccatgtcaactgtgaaatt 2143
Query: 601 ccgagttgtttgattttcttgtaataccgattgavaaggatcactttgwaaaggaaactg 660
|||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||
Sbjct: 2144 ccgagttgtttgattttcttgtaataccgattgaaaaggttcactttgtaaaggaaactg 2203
Query: 661 gatcctttctgatatatctgatggtctttcagaaacaaaatactggattggttctttacg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2204 gatcctttctgatatatctgatggtctttcagaaacaaaatactggattggttctttacg 2263
Query: 721 ggttacttcgaagagaatcctatcataaaaccatagcggatagttcatatttttcagatc 780
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2264 ggttacttcgaagaagatcctatcataaaaccatagcggatagttcatatttttcagatc 2323
Query: 781 aaagttaaaagtttgaacat 800
||||||||||||||||||||
Sbjct: 2324 aaagttaaaagtttgaacat 2343
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5319
Number of Sequences: 1807
Number of extensions: 5319
Number of successful extensions: 143
Number of sequences better than 1.0e-20: 1
length of query: 800
length of database: 10,358,551
effective HSP length: 16
effective length of query: 784
effective length of database: 10,329,639
effective search space: 8098436976
effective search space used: 8098436976
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.3 bits)